Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cldnd1Q9CQX5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Gm43767-201ENSMUST00000198933 381 ntBASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Rarb-207ENSMUST00000225921 2756 ntBASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Gm10154-201ENSMUST00000084445 354 ntBASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cldnd1Q9CQX5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Gm13223-201ENSMUST00000118609 747 ntBASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cldnd1Q9CQX5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cldnd1Q9CQX5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Cldnd1Q9CQX5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.96■□□□□ 0.14
Cldnd1Q9CQX5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Cldnd1Q9CQX5 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms