Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Gm10252-201ENSMUST00000209541 832 ntBASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt88Q9CPR6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt88Q9CPR6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Krt88Q9CPR6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Krt88Q9CPR6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt88Q9CPR6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms