Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Gm45612-201ENSMUST00000211320 160 ntBASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Thap2-203ENSMUST00000218989 527 ntBASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34aQ99PP6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Gm44872-201ENSMUST00000207864 420 ntBASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim34aQ99PP6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim34aQ99PP6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.22■□□□□ 0.67
Trim34aQ99PP6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim34aQ99PP6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34aQ99PP6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms