Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh15Q99PJ1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Gm45384-201ENSMUST00000210451 277 ntBASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Gm6180-201ENSMUST00000065243 498 ntBASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Gm9719-201ENSMUST00000162765 543 ntBASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh15Q99PJ1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Gm6007-201ENSMUST00000208170 823 ntBASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.54■□□□□ 0.4
Pcdh15Q99PJ1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Gm44719-201ENSMUST00000206404 149 ntBASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Gm23984-201ENSMUST00000157139 203 ntBASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.53■□□□□ 0.4
Pcdh15Q99PJ1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh15Q99PJ1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh15Q99PJ1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdh15Q99PJ1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Pcdh15Q99PJ1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdh15Q99PJ1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh15Q99PJ1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdh15Q99PJ1 Gm8515-201ENSMUST00000194852 576 ntBASIC17.52■□□□□ 0.4
Pcdh15Q99PJ1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh15Q99PJ1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.52■□□□□ 0.39
Pcdh15Q99PJ1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Shd-206ENSMUST00000225145 998 ntBASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Gm9899-201ENSMUST00000065519 555 ntBASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Pcdh15Q99PJ1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms