Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Gm4459-201ENSMUST00000118750 468 ntBASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 AW822252-206ENSMUST00000208904 237 ntBASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr3Q99MB1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tlr3Q99MB1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tlr3Q99MB1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.77■□□□□ 0.28
Tlr3Q99MB1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms