Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Gm15920-201ENSMUST00000118998 402 ntBASIC13.72□□□□□ -0.21
Scrt1Q99M85 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.72□□□□□ -0.21
Scrt1Q99M85 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Gm5186-201ENSMUST00000218781 920 ntBASIC13.71□□□□□ -0.21
Scrt1Q99M85 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scrt1Q99M85 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Scrt1Q99M85 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.71□□□□□ -0.22
Scrt1Q99M85 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.7□□□□□ -0.22
Scrt1Q99M85 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.7□□□□□ -0.22
Scrt1Q99M85 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.7□□□□□ -0.22
Scrt1Q99M85 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scrt1Q99M85 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.69□□□□□ -0.22
Scrt1Q99M85 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.69□□□□□ -0.22
Scrt1Q99M85 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.69□□□□□ -0.22
Scrt1Q99M85 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms