Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1b1Q99LU0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp1b1Q99LU0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp1b1Q99LU0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp1b1Q99LU0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Chmp1b1Q99LU0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1b1Q99LU0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1b1Q99LU0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1b1Q99LU0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms