Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lims1Q99JW4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Gm6623-201ENSMUST00000173570 544 ntBASIC14.28□□□□□ -0.12
Lims1Q99JW4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.28□□□□□ -0.12
Lims1Q99JW4 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.28□□□□□ -0.12
Lims1Q99JW4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.28□□□□□ -0.12
Lims1Q99JW4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lims1Q99JW4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Lims1Q99JW4 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.27□□□□□ -0.12
Lims1Q99JW4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims1Q99JW4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims1Q99JW4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims1Q99JW4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lims1Q99JW4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Gm5587-201ENSMUST00000206270 674 ntBASIC14.27□□□□□ -0.13
Lims1Q99JW4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lims1Q99JW4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.26□□□□□ -0.13
Lims1Q99JW4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Gm25406-201ENSMUST00000157599 105 ntBASIC14.26□□□□□ -0.13
Lims1Q99JW4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Gm6659-201ENSMUST00000174752 547 ntBASIC14.26□□□□□ -0.13
Lims1Q99JW4 Gm6345-202ENSMUST00000180900 204 ntBASIC14.26□□□□□ -0.13
Lims1Q99JW4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.26□□□□□ -0.13
Lims1Q99JW4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.26□□□□□ -0.13
Lims1Q99JW4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.26□□□□□ -0.13
Lims1Q99JW4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lims1Q99JW4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms