Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.01■□□□□ 0.47
Rfc4Q99J62 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfc4Q99J62 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rfc4Q99J62 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Gm13294-201ENSMUST00000121757 1330 ntBASIC18■□□□□ 0.47
Rfc4Q99J62 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Gm12892-201ENSMUST00000117367 1146 ntBASIC18■□□□□ 0.47
Rfc4Q99J62 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18■□□□□ 0.47
Rfc4Q99J62 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18■□□□□ 0.47
Rfc4Q99J62 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 AA543401-201ENSMUST00000164248 1269 ntBASIC18■□□□□ 0.47
Rfc4Q99J62 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Gm5177-201ENSMUST00000183092 997 ntBASIC18■□□□□ 0.47
Rfc4Q99J62 Gm5312-201ENSMUST00000203728 547 ntBASIC18■□□□□ 0.47
Rfc4Q99J62 Gm45612-201ENSMUST00000211320 160 ntBASIC18■□□□□ 0.47
Rfc4Q99J62 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rfc4Q99J62 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfc4Q99J62 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.99■□□□□ 0.47
Rfc4Q99J62 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.99■□□□□ 0.47
Rfc4Q99J62 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.99■□□□□ 0.47
Rfc4Q99J62 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.99■□□□□ 0.47
Rfc4Q99J62 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfc4Q99J62 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Gm13365-201ENSMUST00000121188 973 ntBASIC17.98■□□□□ 0.47
Rfc4Q99J62 Gm44335-201ENSMUST00000196879 141 ntBASIC17.98■□□□□ 0.47
Rfc4Q99J62 Gm44297-201ENSMUST00000198304 141 ntBASIC17.98■□□□□ 0.47
Rfc4Q99J62 Gm44346-201ENSMUST00000198851 141 ntBASIC17.98■□□□□ 0.47
Rfc4Q99J62 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms