Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb22Q91XZ8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb22Q91XZ8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb22Q91XZ8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb22Q91XZ8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb22Q91XZ8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Gm7230-201ENSMUST00000173026 815 ntBASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb22Q91XZ8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb22Q91XZ8 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb22Q91XZ8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb22Q91XZ8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb22Q91XZ8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb22Q91XZ8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms