Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb3Q91XZ7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb3Q91XZ7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb3Q91XZ7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Gm16061-201ENSMUST00000122167 857 ntBASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb3Q91XZ7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Gm18958-201ENSMUST00000174258 762 ntBASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb3Q91XZ7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms