Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb8Q91XZ2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Gm7284-201ENSMUST00000131667 944 ntBASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Gm25406-201ENSMUST00000157599 105 ntBASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Gm33142-201ENSMUST00000193913 867 ntBASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb8Q91XZ2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb8Q91XZ2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Gm44454-201ENSMUST00000198541 138 ntBASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb8Q91XZ2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms