Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Gm7284-201ENSMUST00000131667 944 ntBASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Mir3081-201ENSMUST00000175305 84 ntBASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhgb4Q91XX6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb4Q91XX6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb4Q91XX6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Gm25406-201ENSMUST00000157599 105 ntBASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhgb4Q91XX6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms