Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm14701-201ENSMUST00000117156 348 ntBASIC17.9■□□□□ 0.46
Trex1Q91XB0 Gm15427-201ENSMUST00000117288 531 ntBASIC17.9■□□□□ 0.46
Trex1Q91XB0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.9■□□□□ 0.46
Trex1Q91XB0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.9■□□□□ 0.46
Trex1Q91XB0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trex1Q91XB0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.89■□□□□ 0.46
Trex1Q91XB0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trex1Q91XB0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trex1Q91XB0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.89■□□□□ 0.45
Trex1Q91XB0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Gm27494-201ENSMUST00000184735 189 ntBASIC17.89■□□□□ 0.45
Trex1Q91XB0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.89■□□□□ 0.45
Trex1Q91XB0 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.89■□□□□ 0.45
Trex1Q91XB0 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.89■□□□□ 0.45
Trex1Q91XB0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.89■□□□□ 0.45
Trex1Q91XB0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trex1Q91XB0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Gm27301-201ENSMUST00000184012 127 ntBASIC17.88■□□□□ 0.45
Trex1Q91XB0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trex1Q91XB0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Gm8318-201ENSMUST00000182954 872 ntBASIC17.87■□□□□ 0.45
Trex1Q91XB0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.87■□□□□ 0.45
Trex1Q91XB0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trex1Q91XB0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Mir1895-201ENSMUST00000122615 79 ntBASIC17.86■□□□□ 0.45
Trex1Q91XB0 Gm11025-201ENSMUST00000140773 466 ntBASIC17.86■□□□□ 0.45
Trex1Q91XB0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Thap2-203ENSMUST00000218989 527 ntBASIC17.86■□□□□ 0.45
Trex1Q91XB0 Gm8396-201ENSMUST00000057361 823 ntBASIC17.86■□□□□ 0.45
Trex1Q91XB0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms