Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a4Q91VA1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a4Q91VA1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a4Q91VA1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a4Q91VA1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc44a4Q91VA1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Gm12008-201ENSMUST00000117791 755 ntBASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Gm10499-201ENSMUST00000174094 934 ntBASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Gm43474-201ENSMUST00000196415 774 ntBASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Gm44872-201ENSMUST00000207864 420 ntBASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Slc44a4Q91VA1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Mir6990-201ENSMUST00000183724 91 ntBASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc44a4Q91VA1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Gm18889-201ENSMUST00000174284 929 ntBASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a4Q91VA1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc44a4Q91VA1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Slc44a4Q91VA1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.33■□□□□ 0.53
Slc44a4Q91VA1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc44a4Q91VA1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc44a4Q91VA1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc44a4Q91VA1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms