Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.46■□□□□ 0.07
Vsx1Q91V10 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vsx1Q91V10 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.46■□□□□ 0.07
Vsx1Q91V10 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vsx1Q91V10 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vsx1Q91V10 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.46■□□□□ 0.06
Vsx1Q91V10 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vsx1Q91V10 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vsx1Q91V10 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Vsx1Q91V10 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm25948-201ENSMUST00000175334 112 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm4518-201ENSMUST00000182638 718 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Mir6404-201ENSMUST00000183699 94 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.43■□□□□ 0.06
Vsx1Q91V10 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Vsx1Q91V10 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms