Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.47■□□□□ 0.55
StrcQ8VIM6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.47■□□□□ 0.55
StrcQ8VIM6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
StrcQ8VIM6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Gm8515-201ENSMUST00000194852 576 ntBASIC18.46■□□□□ 0.55
StrcQ8VIM6 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.46■□□□□ 0.55
StrcQ8VIM6 Gm6180-201ENSMUST00000065243 498 ntBASIC18.46■□□□□ 0.55
StrcQ8VIM6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Gm4875-201ENSMUST00000118257 786 ntBASIC18.46■□□□□ 0.55
StrcQ8VIM6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Mir7085-201ENSMUST00000184353 66 ntBASIC18.46■□□□□ 0.55
StrcQ8VIM6 Dupd1-202ENSMUST00000224735 548 ntBASIC18.46■□□□□ 0.55
StrcQ8VIM6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
StrcQ8VIM6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.54
StrcQ8VIM6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
StrcQ8VIM6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.45■□□□□ 0.54
StrcQ8VIM6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Gm42612-201ENSMUST00000197986 623 ntBASIC18.45■□□□□ 0.54
StrcQ8VIM6 Gm43170-201ENSMUST00000199827 612 ntBASIC18.45■□□□□ 0.54
StrcQ8VIM6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.45■□□□□ 0.54
StrcQ8VIM6 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.45■□□□□ 0.54
StrcQ8VIM6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
StrcQ8VIM6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Gm23984-201ENSMUST00000157139 203 ntBASIC18.44■□□□□ 0.54
StrcQ8VIM6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.44■□□□□ 0.54
StrcQ8VIM6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.44■□□□□ 0.54
StrcQ8VIM6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.44■□□□□ 0.54
StrcQ8VIM6 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.44■□□□□ 0.54
StrcQ8VIM6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
StrcQ8VIM6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.43■□□□□ 0.54
StrcQ8VIM6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Gm44719-201ENSMUST00000206404 149 ntBASIC18.43■□□□□ 0.54
StrcQ8VIM6 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.43■□□□□ 0.54
StrcQ8VIM6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.43■□□□□ 0.54
StrcQ8VIM6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
StrcQ8VIM6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
StrcQ8VIM6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms