Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.62■□□□□ 0.25
TraipQ8VIG6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TraipQ8VIG6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.62■□□□□ 0.25
TraipQ8VIG6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Gm8318-201ENSMUST00000182954 872 ntBASIC16.62■□□□□ 0.25
TraipQ8VIG6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TraipQ8VIG6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.61■□□□□ 0.25
TraipQ8VIG6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.61■□□□□ 0.25
TraipQ8VIG6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.61■□□□□ 0.25
TraipQ8VIG6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TraipQ8VIG6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.6■□□□□ 0.25
TraipQ8VIG6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Gm43575-201ENSMUST00000196420 516 ntBASIC16.6■□□□□ 0.25
TraipQ8VIG6 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.6■□□□□ 0.25
TraipQ8VIG6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.6■□□□□ 0.25
TraipQ8VIG6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TraipQ8VIG6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Gm23935-201ENSMUST00000102303 57 ntBASIC16.59■□□□□ 0.25
TraipQ8VIG6 Gm24270-201ENSMUST00000102326 57 ntBASIC16.59■□□□□ 0.25
TraipQ8VIG6 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.59■□□□□ 0.25
TraipQ8VIG6 Gm13597-201ENSMUST00000121239 375 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms