Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Odf4Q8VI88 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Odf4Q8VI88 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Odf4Q8VI88 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Odf4Q8VI88 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.05□□□□□ -0.16
Odf4Q8VI88 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf4Q8VI88 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.04□□□□□ -0.16
Odf4Q8VI88 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf4Q8VI88 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Gm15794-201ENSMUST00000120182 631 ntBASIC14.03□□□□□ -0.16
Odf4Q8VI88 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf4Q8VI88 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms