Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Gm37153-201ENSMUST00000193637 231 ntBASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr1Q8VHP6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Gm27702-201ENSMUST00000184512 56 ntBASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr1Q8VHP6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Gm4995-201ENSMUST00000117247 432 ntBASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Gm45167-201ENSMUST00000208007 322 ntBASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr1Q8VHP6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Gm15358-201ENSMUST00000119249 520 ntBASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms