Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpa1Q8VEE4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpa1Q8VEE4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpa1Q8VEE4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Gm29707-201ENSMUST00000196325 491 ntBASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rpa1Q8VEE4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpa1Q8VEE4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms