Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Gm16198-201ENSMUST00000118766 670 ntBASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Gm9794-201ENSMUST00000202370 423 ntBASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Gm28631-201ENSMUST00000190740 334 ntBASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmcd1Q8VEE1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Gm6415-201ENSMUST00000118488 348 ntBASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lmcd1Q8VEE1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Gm12490-201ENSMUST00000120255 560 ntBASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmcd1Q8VEE1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmcd1Q8VEE1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms