Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retreg1dQ8VE91 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Gm2651-201ENSMUST00000203560 838 ntBASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg1dQ8VE91 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg1dQ8VE91 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg1dQ8VE91 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.52■□□□□ 0.07
Retreg1dQ8VE91 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg1dQ8VE91 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.52■□□□□ 0.07
Retreg1dQ8VE91 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Gm43514-201ENSMUST00000198852 424 ntBASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg1dQ8VE91 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms