Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnajc28Q8VCE1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Gm14494-201ENSMUST00000118786 435 ntBASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Dnajc28Q8VCE1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.08■□□□□ 0.33
Dnajc28Q8VCE1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dnajc28Q8VCE1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Dnajc28Q8VCE1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dnajc28Q8VCE1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dnajc28Q8VCE1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dnajc28Q8VCE1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Gm9727-201ENSMUST00000161387 555 ntBASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Gm43575-201ENSMUST00000196420 516 ntBASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms