Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Mir5122-201ENSMUST00000175004 89 ntBASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Gm2274-201ENSMUST00000184539 609 ntBASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nup35Q8R4R6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup35Q8R4R6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Gm10653-202ENSMUST00000139570 835 ntBASIC12.79□□□□□ -0.36
Nup35Q8R4R6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup35Q8R4R6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms