Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdt1Q8R4E9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdt1Q8R4E9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Mir5126-201ENSMUST00000175513 77 ntBASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdt1Q8R4E9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdt1Q8R4E9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms