Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Gm25109-201ENSMUST00000122474 114 ntBASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacnb1Q8R3Z5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacnb1Q8R3Z5 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Gm7430-201ENSMUST00000193824 1144 ntBASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 AC124729.1-202ENSMUST00000225587 938 ntBASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cacnb1Q8R3Z5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Mir466f-3-201ENSMUST00000104788 94 ntBASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Gm36997-201ENSMUST00000195090 707 ntBASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.82■□□□□ 0.44
Cacnb1Q8R3Z5 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 AC164597.2-201ENSMUST00000226738 603 ntBASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb1Q8R3Z5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms