Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cuedc1Q8R3V6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cuedc1Q8R3V6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gm13418-201ENSMUST00000119097 944 ntBASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gm9727-201ENSMUST00000161387 555 ntBASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gm25745-201ENSMUST00000174945 133 ntBASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gm10576-201ENSMUST00000191927 825 ntBASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gm15590-201ENSMUST00000078419 552 ntBASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cuedc1Q8R3V6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Gm15173-201ENSMUST00000122049 433 ntBASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cuedc1Q8R3V6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms