Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.1□□□□□ -0.15
Ccdc58Q8R3Q6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Gm18421-201ENSMUST00000204122 625 ntBASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc58Q8R3Q6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc58Q8R3Q6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc58Q8R3Q6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Gm20760-201ENSMUST00000179197 648 ntBASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Gm29707-201ENSMUST00000196325 491 ntBASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc58Q8R3Q6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Gm21814-202ENSMUST00000203277 873 ntBASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc58Q8R3Q6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms