Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 App-207ENSMUST00000227737 2827 ntBASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpp40Q8R1F9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Gm27628-201ENSMUST00000184911 107 ntBASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 AW822252-206ENSMUST00000208904 237 ntBASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.75■□□□□ 0.27
Rpp40Q8R1F9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Gm37153-201ENSMUST00000193637 231 ntBASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp40Q8R1F9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Gm11764-201ENSMUST00000120221 623 ntBASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Gm1401-201ENSMUST00000122048 772 ntBASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.73■□□□□ 0.27
Rpp40Q8R1F9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms