Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Gm43438-201ENSMUST00000198133 379 ntBASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shtn1Q8K2Q9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Gm9385-201ENSMUST00000117563 472 ntBASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Gm5745-201ENSMUST00000183748 313 ntBASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Gm43125-201ENSMUST00000201724 730 ntBASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shtn1Q8K2Q9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.39■□□□□ 0.54
Shtn1Q8K2Q9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shtn1Q8K2Q9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Gm22175-201ENSMUST00000175007 78 ntBASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shtn1Q8K2Q9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Thap2-203ENSMUST00000218989 527 ntBASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.38■□□□□ 0.53
Shtn1Q8K2Q9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms