Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.53■□□□□ 0.56
Cchcr1Q8K2I2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Mir3081-201ENSMUST00000175305 84 ntBASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cchcr1Q8K2I2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.52■□□□□ 0.55
Cchcr1Q8K2I2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cchcr1Q8K2I2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cchcr1Q8K2I2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Cchcr1Q8K2I2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cchcr1Q8K2I2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Cchcr1Q8K2I2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cchcr1Q8K2I2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cchcr1Q8K2I2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms