Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Gm13312-201ENSMUST00000119631 718 ntBASIC13.97□□□□□ -0.17
ShfQ8CG80 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.97□□□□□ -0.17
ShfQ8CG80 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.97□□□□□ -0.17
ShfQ8CG80 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.97□□□□□ -0.17
ShfQ8CG80 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.97□□□□□ -0.17
ShfQ8CG80 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ShfQ8CG80 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.97□□□□□ -0.17
ShfQ8CG80 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ShfQ8CG80 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
ShfQ8CG80 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ShfQ8CG80 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ShfQ8CG80 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.96□□□□□ -0.17
ShfQ8CG80 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ShfQ8CG80 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
ShfQ8CG80 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.96□□□□□ -0.17
ShfQ8CG80 Gm45328-201ENSMUST00000210942 917 ntBASIC13.96□□□□□ -0.17
ShfQ8CG80 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.96□□□□□ -0.17
ShfQ8CG80 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ShfQ8CG80 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ShfQ8CG80 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.96□□□□□ -0.18
ShfQ8CG80 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
ShfQ8CG80 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ShfQ8CG80 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ShfQ8CG80 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ShfQ8CG80 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ShfQ8CG80 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
ShfQ8CG80 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
ShfQ8CG80 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
ShfQ8CG80 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.95□□□□□ -0.18
ShfQ8CG80 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.95□□□□□ -0.18
ShfQ8CG80 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ShfQ8CG80 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
ShfQ8CG80 Gm11950-201ENSMUST00000121615 838 ntBASIC13.95□□□□□ -0.18
ShfQ8CG80 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
ShfQ8CG80 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.95□□□□□ -0.18
ShfQ8CG80 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.95□□□□□ -0.18
ShfQ8CG80 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
ShfQ8CG80 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ShfQ8CG80 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms