Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab43Q8CG50 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab43Q8CG50 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab43Q8CG50 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rab43Q8CG50 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.25■□□□□ 0.03
Rab43Q8CG50 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Rab43Q8CG50 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.25■□□□□ 0.03
Rab43Q8CG50 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.25■□□□□ 0.03
Rab43Q8CG50 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.25■□□□□ 0.03
Rab43Q8CG50 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.25■□□□□ 0.03
Rab43Q8CG50 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.25■□□□□ 0.03
Rab43Q8CG50 Chchd1-203ENSMUST00000224633 557 ntBASIC15.25■□□□□ 0.03
Rab43Q8CG50 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.25■□□□□ 0.03
Rab43Q8CG50 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.25■□□□□ 0.03
Rab43Q8CG50 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab43Q8CG50 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Gm11025-201ENSMUST00000140773 466 ntBASIC15.24■□□□□ 0.03
Rab43Q8CG50 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rab43Q8CG50 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.24■□□□□ 0.03
Rab43Q8CG50 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab43Q8CG50 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.23■□□□□ 0.03
Rab43Q8CG50 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.23■□□□□ 0.03
Rab43Q8CG50 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.23■□□□□ 0.03
Rab43Q8CG50 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab43Q8CG50 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.22■□□□□ 0.03
Rab43Q8CG50 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab43Q8CG50 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms