Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb7Q8CDY9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Pcdhb7Q8CDY9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb7Q8CDY9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb7Q8CDY9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Gm15794-201ENSMUST00000120182 631 ntBASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb7Q8CDY9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms