Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Mir3081-201ENSMUST00000175305 84 ntBASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Gm27742-201ENSMUST00000184667 60 ntBASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.41■□□□□ 0.38
Ccdc38Q8CDN8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Rprl3-201ENSMUST00000157400 290 ntBASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc38Q8CDN8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.39■□□□□ 0.38
Ccdc38Q8CDN8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc38Q8CDN8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc38Q8CDN8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc38Q8CDN8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms