Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Rn7s2-201ENSMUST00000175032 300 ntBASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Gm26461-201ENSMUST00000175064 290 ntBASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Gm13233-201ENSMUST00000118760 1443 ntBASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Gm13244-201ENSMUST00000118855 1446 ntBASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC24■■□□□ 1.43
Pabpn1Q8CCS6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Gm28911-201ENSMUST00000188837 117 ntBASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Pabpn1Q8CCS6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 Gm7172-201ENSMUST00000218047 1152 ntBASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pabpn1Q8CCS6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Gm3786-201ENSMUST00000202659 378 ntBASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Gm44799-201ENSMUST00000207639 1202 ntBASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpn1Q8CCS6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 AC159747.1-201ENSMUST00000219903 265 ntBASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Gm19220-201ENSMUST00000222682 803 ntBASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 CT009510.1-201ENSMUST00000227972 270 ntBASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Pabpn1Q8CCS6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Gm16570-201ENSMUST00000161951 436 ntBASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Gm9728-201ENSMUST00000200197 1055 ntBASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Gm7390-201ENSMUST00000212452 1216 ntBASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpn1Q8CCS6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms