Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Gm14722-201ENSMUST00000118943 689 ntBASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Gm8318-201ENSMUST00000182954 872 ntBASIC18.14■□□□□ 0.49
Shisa4Q8CA71 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa4Q8CA71 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.13■□□□□ 0.49
Shisa4Q8CA71 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Gm9682-201ENSMUST00000197505 556 ntBASIC18.13■□□□□ 0.49
Shisa4Q8CA71 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.13■□□□□ 0.49
Shisa4Q8CA71 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.13■□□□□ 0.49
Shisa4Q8CA71 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa4Q8CA71 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Gm23935-201ENSMUST00000102303 57 ntBASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Gm24270-201ENSMUST00000102326 57 ntBASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Gm24245-201ENSMUST00000157318 57 ntBASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shisa4Q8CA71 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Gm2756-201ENSMUST00000195851 400 ntBASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.11■□□□□ 0.49
Shisa4Q8CA71 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 BC037039-201ENSMUST00000192003 2205 ntBASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Shisa4Q8CA71 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shisa4Q8CA71 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shisa4Q8CA71 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms