Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc46a2Q8CA03 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.08■□□□□ 0
Slc46a2Q8CA03 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Mir6404-201ENSMUST00000183699 94 ntBASIC15.08■□□□□ 0
Slc46a2Q8CA03 Mir1668-201ENSMUST00000184114 107 ntBASIC15.08■□□□□ 0
Slc46a2Q8CA03 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.08■□□□□ 0
Slc46a2Q8CA03 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.08■□□□□ 0
Slc46a2Q8CA03 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc46a2Q8CA03 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.07■□□□□ 0
Slc46a2Q8CA03 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.07■□□□□ 0
Slc46a2Q8CA03 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.07■□□□□ 0
Slc46a2Q8CA03 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.07■□□□□ 0
Slc46a2Q8CA03 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.07■□□□□ 0
Slc46a2Q8CA03 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc46a2Q8CA03 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.06■□□□□ 0
Slc46a2Q8CA03 Gm44430-201ENSMUST00000203376 995 ntBASIC15.06■□□□□ 0
Slc46a2Q8CA03 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.06■□□□□ 0
Slc46a2Q8CA03 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.06■□□□□ 0
Slc46a2Q8CA03 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Gm5417-201ENSMUST00000079706 384 ntBASIC15.06■□□□□ 0
Slc46a2Q8CA03 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc46a2Q8CA03 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms