Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim9Q8C7M3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim9Q8C7M3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Gm8655-201ENSMUST00000221159 852 ntBASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.28■□□□□ 0.36
Trim9Q8C7M3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Trim9Q8C7M3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim9Q8C7M3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim9Q8C7M3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim9Q8C7M3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim9Q8C7M3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim9Q8C7M3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Gm19164-201ENSMUST00000210667 640 ntBASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim9Q8C7M3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms