Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska3Q8C263 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.74□□□□□ -0.05
Ska3Q8C263 Gm27459-201ENSMUST00000184860 107 ntBASIC14.74□□□□□ -0.05
Ska3Q8C263 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.74□□□□□ -0.05
Ska3Q8C263 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.74□□□□□ -0.05
Ska3Q8C263 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska3Q8C263 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska3Q8C263 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska3Q8C263 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska3Q8C263 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska3Q8C263 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.74□□□□□ -0.05
Ska3Q8C263 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ska3Q8C263 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska3Q8C263 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.74□□□□□ -0.05
Ska3Q8C263 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ska3Q8C263 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ska3Q8C263 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.73□□□□□ -0.05
Ska3Q8C263 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Ska3Q8C263 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.73□□□□□ -0.05
Ska3Q8C263 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ska3Q8C263 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Ska3Q8C263 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.73□□□□□ -0.05
Ska3Q8C263 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.73□□□□□ -0.05
Ska3Q8C263 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ska3Q8C263 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ska3Q8C263 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.73□□□□□ -0.05
Ska3Q8C263 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.73□□□□□ -0.05
Ska3Q8C263 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ska3Q8C263 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.73□□□□□ -0.05
Ska3Q8C263 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska3Q8C263 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Ska3Q8C263 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.72□□□□□ -0.05
Ska3Q8C263 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.72□□□□□ -0.05
Ska3Q8C263 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ska3Q8C263 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Ska3Q8C263 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.72□□□□□ -0.05
Ska3Q8C263 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.72□□□□□ -0.05
Ska3Q8C263 Gm8655-201ENSMUST00000221159 852 ntBASIC14.72□□□□□ -0.05
Ska3Q8C263 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.72□□□□□ -0.05
Ska3Q8C263 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.72□□□□□ -0.05
Ska3Q8C263 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska3Q8C263 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Ska3Q8C263 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Ska3Q8C263 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ska3Q8C263 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.71□□□□□ -0.05
Ska3Q8C263 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.71□□□□□ -0.05
Ska3Q8C263 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ska3Q8C263 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska3Q8C263 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ska3Q8C263 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms