Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Gm43514-201ENSMUST00000198852 424 ntBASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Gm18206-201ENSMUST00000207027 926 ntBASIC17.34■□□□□ 0.37
Trim47Q8C0E3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.34■□□□□ 0.37
Trim47Q8C0E3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.34■□□□□ 0.37
Trim47Q8C0E3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim47Q8C0E3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim47Q8C0E3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trim47Q8C0E3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trim47Q8C0E3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.33■□□□□ 0.37
Trim47Q8C0E3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim47Q8C0E3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim47Q8C0E3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Gm5364-201ENSMUST00000216789 889 ntBASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim47Q8C0E3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim47Q8C0E3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trim47Q8C0E3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim47Q8C0E3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms