Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Gm10175-201ENSMUST00000086013 645 ntBASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sh3rf2Q8BZT2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Gm14822-201ENSMUST00000122247 291 ntBASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sh3rf2Q8BZT2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3rf2Q8BZT2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sh3rf2Q8BZT2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sh3rf2Q8BZT2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Sh3rf2Q8BZT2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
Sh3rf2Q8BZT2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sh3rf2Q8BZT2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Sh3rf2Q8BZT2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Sh3rf2Q8BZT2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sh3rf2Q8BZT2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Gm25911-201ENSMUST00000157621 56 ntBASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms