Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdk5rap1Q8BTW8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdk5rap1Q8BTW8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdk5rap1Q8BTW8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm11779-201ENSMUST00000118541 368 ntBASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm15467-201ENSMUST00000120582 445 ntBASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm12260-201ENSMUST00000122447 411 ntBASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap1Q8BTW8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap1Q8BTW8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap1Q8BTW8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap1Q8BTW8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms