Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne3Q8BT60 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne3Q8BT60 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Gm5587-201ENSMUST00000206270 674 ntBASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne3Q8BT60 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms