Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scfd1Q8BRF7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Gm8318-201ENSMUST00000182954 872 ntBASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scfd1Q8BRF7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Gm17968-201ENSMUST00000194902 784 ntBASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scfd1Q8BRF7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scfd1Q8BRF7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scfd1Q8BRF7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scfd1Q8BRF7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scfd1Q8BRF7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.83■□□□□ 0.45
Scfd1Q8BRF7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Scfd1Q8BRF7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scfd1Q8BRF7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scfd1Q8BRF7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scfd1Q8BRF7 Gm17271-201ENSMUST00000165535 355 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms