Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Smco3Q8BQM7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.94□□□□□ -0.34
Smco3Q8BQM7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Gm38027-201ENSMUST00000192315 235 ntBASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smco3Q8BQM7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smco3Q8BQM7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms