Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC20.37■□□□□ 0.85
Col16a1Q8BLX7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col16a1Q8BLX7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Gm13453-201ENSMUST00000118708 357 ntBASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Mir8102-201ENSMUST00000184148 139 ntBASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col16a1Q8BLX7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Gm13015-201ENSMUST00000118674 204 ntBASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Gm13823-201ENSMUST00000119930 345 ntBASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col16a1Q8BLX7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col16a1Q8BLX7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col16a1Q8BLX7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col16a1Q8BLX7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Col16a1Q8BLX7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col16a1Q8BLX7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col16a1Q8BLX7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 CT009510.1-201ENSMUST00000227972 270 ntBASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col16a1Q8BLX7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms