Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim6Q8BGE7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Gm13436-201ENSMUST00000120418 567 ntBASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim6Q8BGE7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim6Q8BGE7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim6Q8BGE7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Gm37055-201ENSMUST00000191866 133 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms