Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm18421-201ENSMUST00000204122 625 ntBASIC15.16■□□□□ 0.02
Trim36Q80WG7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.16■□□□□ 0.02
Trim36Q80WG7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Gm27742-201ENSMUST00000184667 60 ntBASIC15.15■□□□□ 0.02
Trim36Q80WG7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Trim36Q80WG7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.15■□□□□ 0.02
Trim36Q80WG7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim36Q80WG7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.14■□□□□ 0.01
Trim36Q80WG7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim36Q80WG7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.13■□□□□ 0.01
Trim36Q80WG7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Gm18669-201ENSMUST00000216049 778 ntBASIC15.13■□□□□ 0.01
Trim36Q80WG7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim36Q80WG7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim36Q80WG7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.12■□□□□ 0.01
Trim36Q80WG7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim36Q80WG7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms